Mathematical biology/Bibliography: Difference between revisions

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*{{citation
| last1 = Berret | first1 =  Bastien
| last2 = Darlot | first2 =  Christian
| last3 = Jean | first3 =  Frédéric
| last4 = Pozzo1 | first4 =  Thierry
| last5 = Papaxanthis | first5 =  Charalambos
| last6 = Gauthier | first6 =  Jean Paul
| year = 2008
| title = The Inactivation Principle: Mathematical Solutions Minimizing the Absolute Work and Biological Implications for the Planning of Arm Movements
| journal = PLoS Computational Biology
| volume = 4
| pages = e1000194
| doi = 10.1371/journal.pcbi.1000194
}}
:A nice example of how biological and mathematical research may intertwine at times
*[http://books.nap.edu/catalog.php?record_id=12026#toc The Role of Theory in Advancing 21st-Century Biology:Catalyzing Transformative Research]
*[http://books.nap.edu/catalog.php?record_id=12026#toc The Role of Theory in Advancing 21st-Century Biology:Catalyzing Transformative Research]
*de Vries G, Hillen T. (2008) [http://dx.doi.org/10.1007/978-0-8176-4556-4_32 Teaching Mathematical Biology in a Summer School for Undergraduates.] ''Mathematical Modeling of Biological Systems'' Volume II, Chapter 32, pages 369-377. | Serves as an introduction to the discipline of mathematical biology as taught in one undergraduate setting.
**Our summer school…teaches the following applied math skills in the context of mathematical biology: theory, modelling, analysis, computation, data fitting, and prediction.
*Cohen JE (2004) [http://dx.doli.org/10.1371/journal.pbio.0020439 Mathematics Is Biology's Next Microscope, Only Better; Biology Is Mathematics' Next Physics, Only Better.] PLoS Biol 2(12): e439.
**Charles Darwin was right when he wrote that people with an understanding “of the great leading principles of mathematics… seem to have an extra sense” (F. Darwin 1905 [Darwin F, editor. (1905) The life and letters of Charles Darwin. New York: Appleton. Available: http://pages.britishlibrary.net/charles.darwin/texts/letters/letters1_02.html via the Internet.]). Today's biologists increasingly recognize that appropriate mathematics can help interpret any kind of data. In this sense, mathematics is biology's next microscope, only better.
==[[Biology's next microscope: Mathematics]]==
*{{citation
| last1 = Berret | first1 =  Bastien
| last2 = Darlot | first2 =  Christian
| last3 = Jean | first3 =  Frédéric
| last4 = Pozzo1 | first4 =  Thierry
| last5 = Papaxanthis | first5 =  Charalambos
| last6 = Gauthier | first6 =  Jean Paul
| year = 2008
| title = The Inactivation Principle: Mathematical Solutions Minimizing the Absolute Work and Biological Implications for the Planning of Arm Movements
| journal = PLoS Computational Biology
| volume = 4
| pages = e1000194
| doi = 10.1371/journal.pcbi.1000194
}}
:A nice example of how biological and mathematical research may intertwine at times
*[http://books.nap.edu/catalog.php?record_id=12026#toc The Role of Theory in Advancing 21st-Century Biology:Catalyzing Transformative Research]
{{cite journal
| author = Wigner, E.
| year = 1960
| title = The unreasonable effectiveness of mathematics in the natural sciences
| journal = Communications in Pure and Applied Mathematics
| volume = 13
| issue = 1
| pages = 1-14
| doi = 10.1002/cpa.3160130102
}}
{{cite journal
| author = Dole, V.P.
| year = 1965
| title = The New Curriculum In Mathematics For Biologists. Intersection Of Mathematics And Biology.
| journal = Fed Proc
| volume = 24
| pages = 1-4
| url = http://www.ncbi.nlm.nih.gov/pubmed/14278994
}}
{{cite journal
| author = Sterling, T.D.
| year = 1965
| title = Toward An Undergraduate Mathematics Program For Future Researchers In The Fields Of Biology And Medicine.
| journal = Fed Proc
| volume = 24
| pages = 5-9
| url = http://www.ncbi.nlm.nih.gov/pubmed/14279003
}}
{{cite journal
| author = Zeeman, E.C.
| year = 1966
| title = Mathematics and creative thinking
| journal = Psychiatric Quarterly
| volume = 40
| issue = 1
| pages = 348-354
| url = http://www.springerlink.com/index/W7438246225L21JR.pdf
}}
{{cite journal
| author = Kudô, A.
| year = 1979
| title = Role of mathematics in cancer research: attitudes and training of Japanese mathematicians.
| journal = Environmental Health Perspectives
| volume = 32
| pages = 5-9
| url = http://www.pubmedcentral.nih.gov/picrender.fcgi?artid=1637949&blobtype=pdf
}}
{{cite journal
| author = Chytil, M.K.
| year = 1977
| title = On the concept of biomathematics
| journal = Acta Biotheoretica
| volume = 26
| issue = 2
| pages = 137-150
| url = http://www.springerlink.com/index/P528331X6251T717.pdf
}}
{{cite journal
| author = Rigoutsos, I.
| coauthors = Floratos, A.; Parida, L.; Gao, Y.; Platt, D.
| year = 2000
| title = The Emergence of Pattern Discovery Techniques in Computational Biology
| journal = Metabolic Engineering
| volume = 2
| issue = 3
| pages = 159-177
| url = http://linkinghub.elsevier.com/retrieve/pii/S1096717600901514
}}
{{cite journal
| author = Rose, S.P.R.
| year = 2002
| title = The Biology of the Future and the Future of Biology
| journal = Journal of Molecular Biology
| volume = 319
| issue = 4
| pages = 877-884
| url = http://linkinghub.elsevier.com/retrieve/pii/S0022283602003327
}}
{{cite journal
| author = Morchio, R.
| year = 2002
| title = Conditions for a Theoretical Biology: Is Biology Truly an Autonomous Science?
| journal = Rivista di Biologia/Biology Forum
| volume = 95
| pages = 149-158
| url = http://www2.tilgher.it/manager/googlepdf.aspx?file=riv_t4a7f19o722.pdf
}}
{{cite journal
| author = Butcher, E.C.
| coauthors = Berg, E.L.; Kunkel, E.J.
| year = 2004
| title = Systems biology in drug discovery
| journal = Nature Biotechnology
| volume = 22
| issue = 10
| pages = 1253-1259
| doi = 10.1038/nbt1017
}}
{{cite journal
| author = Bialek, W.
| coauthors = Botstein, D.
| year = 2004
| title = Introductory Science and Mathematics Education for 21st-Century Biologists
| journal = Science
| volume = 303
| issue = 5659
| pages = 788-790
| url = http://www.sciencemag.org/cgi/content/abstract/sci;303/5659/788
}}
{{cite journal
| author = May, R.M.
| year = 2004
| title = Uses and abuses of mathematics in biology.
| journal = Science
| volume = 303
| issue = 5659
| pages = 790-3
| url = http://www.sciencemag.org/cgi/content/abstract/sci;303/5659/790
}}
{{cite journal
| author = Lipan, O.
| coauthors = Wong, W.H.
| year = 2006
| title = Is the future biology Shakespearean or Newtonian?
| journal = Molecular BioSystems
| volume = 2
| issue = 9
| pages = 411-416
| doi = 10.1039/b607243g
}}
{{cite journal
| author = Herrero, M.A.
| year = 2007
| title = On the role of mathematics in biology
| journal = Journal of Mathematical Biology
| volume = 54
| issue = 6
| pages = 887-889
| url = http://www.springerlink.com/index/GH80564750W50183.pdf
}}
{{cite journal
| author = Van Hemmen, J.L.
| year = 2007
| title = Biology and mathematics: A fruitful merger of two cultures
| journal = Biological Cybernetics
| volume = 97
| issue = 1
| pages = 1-3
| url = http://www.springerlink.com/index/L7103222080TH108.pdf
}}
{{cite journal
| author = Cull, P.
| year = 2007
| title = The mathematical biophysics of Nicolas Rashevsky
| journal = BioSystems
| volume = 88
| issue = 3
| pages = 178-184
| url = http://linkinghub.elsevier.com/retrieve/pii/S0303264706002140
}}

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https://en.citizendium.org/wiki/index.php?title=Mathematical_biology/Bibliography&printable=yes
A list of key readings about Mathematical biology.
Please sort and annotate in a user-friendly manner. For formatting, consider using automated reference wikification.
  • Berret, Bastien; Christian Darlot & Frédéric Jean et al. (2008), "The Inactivation Principle: Mathematical Solutions Minimizing the Absolute Work and Biological Implications for the Planning of Arm Movements", PLoS Computational Biology 4: e1000194, DOI:10.1371/journal.pcbi.1000194
A nice example of how biological and mathematical research may intertwine at times
  • de Vries G, Hillen T. (2008) Teaching Mathematical Biology in a Summer School for Undergraduates. Mathematical Modeling of Biological Systems Volume II, Chapter 32, pages 369-377. | Serves as an introduction to the discipline of mathematical biology as taught in one undergraduate setting.
    • Our summer school…teaches the following applied math skills in the context of mathematical biology: theory, modelling, analysis, computation, data fitting, and prediction.

Biology's next microscope: Mathematics

  • Berret, Bastien; Christian Darlot & Frédéric Jean et al. (2008), "The Inactivation Principle: Mathematical Solutions Minimizing the Absolute Work and Biological Implications for the Planning of Arm Movements", PLoS Computational Biology 4: e1000194, DOI:10.1371/journal.pcbi.1000194
A nice example of how biological and mathematical research may intertwine at times

Wigner, E. (1960). "The unreasonable effectiveness of mathematics in the natural sciences". Communications in Pure and Applied Mathematics 13 (1): 1-14. DOI:10.1002/cpa.3160130102. Research Blogging.

Dole, V.P. (1965). "The New Curriculum In Mathematics For Biologists. Intersection Of Mathematics And Biology.". Fed Proc 24: 1-4.

Sterling, T.D. (1965). "Toward An Undergraduate Mathematics Program For Future Researchers In The Fields Of Biology And Medicine.". Fed Proc 24: 5-9.

Zeeman, E.C. (1966). "Mathematics and creative thinking". Psychiatric Quarterly 40 (1): 348-354.

Kudô, A. (1979). "Role of mathematics in cancer research: attitudes and training of Japanese mathematicians.". Environmental Health Perspectives 32: 5-9.

Chytil, M.K. (1977). "On the concept of biomathematics". Acta Biotheoretica 26 (2): 137-150.

Rigoutsos, I.; Floratos, A.; Parida, L.; Gao, Y.; Platt, D. (2000). "The Emergence of Pattern Discovery Techniques in Computational Biology". Metabolic Engineering 2 (3): 159-177.

Rose, S.P.R. (2002). "The Biology of the Future and the Future of Biology". Journal of Molecular Biology 319 (4): 877-884.

Morchio, R. (2002). "Conditions for a Theoretical Biology: Is Biology Truly an Autonomous Science?". Rivista di Biologia/Biology Forum 95: 149-158.

Butcher, E.C.; Berg, E.L.; Kunkel, E.J. (2004). "Systems biology in drug discovery". Nature Biotechnology 22 (10): 1253-1259. DOI:10.1038/nbt1017. Research Blogging.

Bialek, W.; Botstein, D. (2004). "Introductory Science and Mathematics Education for 21st-Century Biologists". Science 303 (5659): 788-790.

May, R.M. (2004). "Uses and abuses of mathematics in biology.". Science 303 (5659): 790-3.

Lipan, O.; Wong, W.H. (2006). "Is the future biology Shakespearean or Newtonian?". Molecular BioSystems 2 (9): 411-416. DOI:10.1039/b607243g. Research Blogging.

Herrero, M.A. (2007). "On the role of mathematics in biology". Journal of Mathematical Biology 54 (6): 887-889.

Van Hemmen, J.L. (2007). "Biology and mathematics: A fruitful merger of two cultures". Biological Cybernetics 97 (1): 1-3.

Cull, P. (2007). "The mathematical biophysics of Nicolas Rashevsky". BioSystems 88 (3): 178-184.

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